ReSearch made simple

FHIR-Aggregator: Your Catalog of Research Data¶

Use the FHIR Aggregator server to search patient phenotypes across multiple biomedical resources and download their files. The FHIR Aggregator server acts as a centralized repository for diverse healthcare data, organized using the FHIR (Fast Healthcare Interoperability Resources) standard. It provides researchers access to a wide range of information, including:

Clinical data: Patient demographics, conditions, medications, observations, and procedures.
Research studies: Information about research projects, participants, and study protocols.
OMICS data associated with Specimens
Learn more about the data sets we aggregate here

fhir-query: Your FHIR Querying Assistant¶

Our command-line tool fhir-query (aka fq) is designed to simplify the process of interacting with FHIR servers. It provides researchers with a convenient way to:

Retrieve the vocabulary of a FHIR server: With the vocabulary command, fq fetches and summarizes the key data elements (CodeableConcepts and Extensions) used within the FHIR data. This creates a central vocabulary Dataframe that helps researchers identify important data elements and their usage within the server.
Execute queries to retrieve FHIR resources: Researchers can then use fq to execute FHIR queries using a readable syntax. This helps to retrieve and filter data from the FHIR Server based on various search parameters and criteria.

Low code, no install

Fill in the blanks in our pre-built queries to find the data you need without installing a thing. Find the data you need, fetch all the files, and answer your scientific questions all without ever touching the command line. Launch FHIR-Aggregator in the cloud
Use our query tool

Install fhir-query, our tool for easily searching FHIR databases, with pip and direct it to the fhir aggregator server to get up and running in no time
```
pip install fhir-aggregator-client
```
```
%env FHIR_BASE=https://google-fhir.fhir-aggregator.org
```
Already know FHIR?

Direct your command line to the fhir aggregator server and query using your favorite file transfer tool
```
FHIR_BASE=https://google-fhir.fhir-aggregator.org
```